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Published on: 2/12/2026
Headache and stomach ache together are common in women, are usually not dangerous, and most often relate to migraines, hormonal shifts around periods or perimenopause, stress, dehydration, viral illness, IBS, or food triggers, often improving with rest, hydration, and trigger management. Seek urgent care for red flags like the worst sudden headache, stiff neck with fever or confusion, severe or worsening abdominal pain, blood in vomit or stool, persistent vomiting, or signs of dehydration. There are several factors to consider, and key self care steps plus when to see a doctor are outlined in detail below.
Experiencing a headache and stomach ache at the same time can feel frustrating and confusing. Are they connected? Is it something you ate? Stress? Hormones?
For women especially, there are several common — and very treatable — reasons why these two symptoms happen together. In most cases, the cause is not dangerous. However, it's important to understand when symptoms may signal something more serious.
This guide will walk you through:
The brain and the gut are closely connected. This link is called the gut-brain axis. Stress, hormones, inflammation, and even dehydration can trigger both a headache and stomach discomfort at the same time.
Women may experience this combination more often due to:
Let's look at the most common causes.
Migraines are more than "bad headaches." They often include digestive symptoms.
Common signs of migraine:
Some women experience abdominal migraine, where stomach pain is a major symptom alongside headache.
Hormonal changes during menstruation can also trigger migraines, often causing both headache and stomach ache together.
What helps:
Hormones play a powerful role in both head pain and digestive symptoms.
Before or during your period, you may experience:
Prostaglandins (hormone-like substances released during menstruation) can trigger uterine contractions and also affect the digestive tract, leading to stomach pain and loose stools.
Perimenopause can also cause fluctuating estrogen levels, leading to:
What helps:
Stress doesn't just live in your mind — it shows up physically.
When you're stressed:
Chronic stress can cause ongoing headache and stomach ache, especially tension headaches paired with upper abdominal discomfort.
What helps:
One of the simplest — and most overlooked — causes of headache and stomach ache is dehydration.
Signs include:
Even mild dehydration can trigger symptoms.
What helps:
Viruses can affect both the digestive system and the nervous system.
You may notice:
These symptoms usually improve within a few days.
What helps:
Certain foods may trigger both symptoms.
Common culprits include:
Food poisoning often causes sudden stomach pain, nausea, and headache within hours of eating contaminated food.
Women are more likely than men to have IBS.
Symptoms may include:
IBS is not dangerous, but it can significantly affect quality of life.
Most cases are mild. However, seek urgent medical care if you experience:
These symptoms could indicate serious conditions such as meningitis, internal bleeding, severe infection, or other emergencies.
Do not ignore these warning signs — speak to a doctor immediately.
If your symptoms are mild, try:
If you're experiencing persistent stomach symptoms and want to better understand what might be causing them, try this free Abdominal Discomfort symptom checker to get personalized insights and guidance on next steps.
Make an appointment if:
Always speak to a doctor right away if anything feels severe, sudden, or life-threatening.
Experiencing a headache and stomach ache at the same time is common, especially for women. Hormones, stress, migraines, dehydration, viral illnesses, and digestive conditions are frequent causes.
In most cases, symptoms improve with rest, hydration, and simple self-care. However, persistent, worsening, or severe symptoms should never be ignored.
Listen to your body. Track patterns. Take symptoms seriously — but don't panic.
And when in doubt, speak to a doctor to rule out anything serious and get the right treatment for you.
(References)
* Singh P, Park YS, Kim HS. Comorbidity of Irritable Bowel Syndrome and Migraine: A Comprehensive Review. J Clin Neurol. 2021 Jul;17(3):337-347. doi: 10.3988/jcn.2021.17.3.337. Epub 2021 Jun 30. PMID: 34208076; PMCID: PMC8290333.
* Goudarzi A, Khani M, Ghassab-Abdollahi M, Ghadiri S, Mousavi SA, Khoshnevisan A, Gholamnezhad Z, Baharvand-Ahmadi H, Safarpour A. Gastrointestinal disorders in women with migraine: A systematic review and meta-analysis. Cephalalgia. 2024 Apr;44(4):3331024241229744. doi: 10.1177/03331024241229744. PMID: 38317774.
* Mishra R, Verma R, Suman M, Pandey S, Saxena AK, Singh A, Singh P. Premenstrual syndrome and premenstrual dysphoric disorder: current state of knowledge. Arch Gynecol Obstet. 2023 Nov;308(5):1653-1662. doi: 10.1007/s00404-023-07119-7. Epub 2023 Aug 26. PMID: 37628867; PMCID: PMC10675713.
* Li J, Chen F, Pan Y, He M. Endometriosis and Migraine: A Systematic Review and Meta-Analysis. Pain Res Manag. 2023 Jan 27;2023:7633722. doi: 10.1155/2023/7633722. PMID: 36735552; PMCID: PMC9897184.
* Singh P, Sharma S, Singh A, Tripathi A, Goel P, Singh S. Thyroid Dysfunction and Headache: A Narrative Review. Cureus. 2023 Aug 29;15(8):e44315. doi: 10.7759/cureus.44315. PMID: 37775558; PMCID: PMC10526017.
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